Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AP002414.3-201ENST00000589352 1468 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AC009078.2-202ENST00000463353 338 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 SLC25A6P4-201ENST00000586535 553 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 AL671710.1-201ENST00000610245 2349 ntBASIC14.91□□□□□ -0.02
TMEM53Q6P2H8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LINC00528-201ENST00000600723 2160 ntBASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 AC012640.2-201ENST00000561606 901 ntBASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM53Q6P2H8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 CICP24-201ENST00000605464 2705 ntBASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM53Q6P2H8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms