Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT39Q6A163 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT39Q6A163 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRT39Q6A163 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT39Q6A163 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT39Q6A163 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT39Q6A163 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT39Q6A163 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.4■□□□□ 0.38
KRT39Q6A163 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.4■□□□□ 0.38
KRT39Q6A163 AP001059.3-201ENST00000619053 235 ntBASIC17.4■□□□□ 0.38
KRT39Q6A163 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.4■□□□□ 0.38
KRT39Q6A163 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
KRT39Q6A163 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 BNIP3P1-202ENST00000550043 1585 ntBASIC17.4■□□□□ 0.38
KRT39Q6A163 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT39Q6A163 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT39Q6A163 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.39■□□□□ 0.38
KRT39Q6A163 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.39■□□□□ 0.38
KRT39Q6A163 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT39Q6A163 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
KRT39Q6A163 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
KRT39Q6A163 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT39Q6A163 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRT39Q6A163 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT39Q6A163 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KRT39Q6A163 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
KRT39Q6A163 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT39Q6A163 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.39■□□□□ 0.37
KRT39Q6A163 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.39■□□□□ 0.37
KRT39Q6A163 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.39■□□□□ 0.37
KRT39Q6A163 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
KRT39Q6A163 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT39Q6A163 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 CYP4F24P-201ENST00000586049 1580 ntBASIC17.39■□□□□ 0.37
KRT39Q6A163 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT39Q6A163 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KRT39Q6A163 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.39■□□□□ 0.37
KRT39Q6A163 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRT39Q6A163 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT39Q6A163 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT39Q6A163 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT39Q6A163 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT39Q6A163 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRT39Q6A163 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT39Q6A163 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.38■□□□□ 0.37
KRT39Q6A163 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.38■□□□□ 0.37
KRT39Q6A163 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT39Q6A163 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.38■□□□□ 0.37
KRT39Q6A163 AL512356.2-201ENST00000546955 174 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms