Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 KRT18P64-201ENST00000434946 1219 ntBASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 AC009542.2-202ENST00000619004 1067 ntBASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD4Q5XG99 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 C2orf27AP3-201ENST00000434123 579 ntBASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 AC093433.1-201ENST00000458048 571 ntBASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 AC106760.1-201ENST00000508690 800 ntBASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 AL354718.3-201ENST00000616414 581 ntBASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 CR382287.1-201ENST00000623954 586 ntBASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 RHOXF1P1-202ENST00000635473 501 ntBASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms