Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 SCARNA2-201ENST00000458748 420 ntBASIC15.63■□□□□ 0.09
RNF220Q5VTB9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 SART3-203ENST00000546611 1184 ntBASIC15.63■□□□□ 0.09
RNF220Q5VTB9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 AC139887.3-201ENST00000568585 713 ntBASIC15.63■□□□□ 0.09
RNF220Q5VTB9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SAPCD2P3-201ENST00000455031 850 ntBASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 MTDHP4-201ENST00000600287 670 ntBASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF220Q5VTB9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RNF220Q5VTB9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
RNF220Q5VTB9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RNF220Q5VTB9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RNF220Q5VTB9 LINC01101-201ENST00000622953 1884 ntBASIC15.61■□□□□ 0.09
RNF220Q5VTB9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms