Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 AC105250.1-201ENST00000509378 2057 ntBASIC16.72■□□□□ 0.27
LRRC38Q5VT99 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 AC092850.2-201ENST00000623821 2697 ntBASIC16.72■□□□□ 0.27
LRRC38Q5VT99 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 CICP13-201ENST00000422015 2789 ntBASIC16.72■□□□□ 0.27
LRRC38Q5VT99 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 MIR574-201ENST00000385209 96 ntBASIC16.71■□□□□ 0.27
LRRC38Q5VT99 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC38Q5VT99 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.71■□□□□ 0.26
LRRC38Q5VT99 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
LRRC38Q5VT99 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC38Q5VT99 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC38Q5VT99 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 AL139010.1-201ENST00000454878 894 ntBASIC16.7■□□□□ 0.26
LRRC38Q5VT99 IGHV3-62-201ENST00000520057 340 ntBASIC16.7■□□□□ 0.26
LRRC38Q5VT99 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC38Q5VT99 MTDHP5-201ENST00000598980 586 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms