Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AL133267.1-201ENST00000398220 340 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 SLC25A24P2-201ENST00000415059 510 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AP001582.1-201ENST00000525856 295 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AC145423.3-201ENST00000615987 467 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AC007613.1-201ENST00000572811 2597 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AC018470.1-201ENST00000624790 3129 ntBASIC19.99■□□□□ 0.79
RC3H1Q5TC82 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 CD8B2-202ENST00000417670 633 ntBASIC19.98■□□□□ 0.79
RC3H1Q5TC82 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 AC244452.3-201ENST00000636814 210 ntBASIC19.98■□□□□ 0.79
RC3H1Q5TC82 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.98■□□□□ 0.79
RC3H1Q5TC82 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AC007969.1-201ENST00000433675 447 ntBASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AC004898.1-201ENST00000451057 766 ntBASIC19.97■□□□□ 0.79
RC3H1Q5TC82 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AC138951.2-201ENST00000623455 1161 ntBASIC19.97■□□□□ 0.79
RC3H1Q5TC82 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AL645608.8-201ENST00000606034 2086 ntBASIC19.97■□□□□ 0.79
RC3H1Q5TC82 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AP001094.4-201ENST00000579008 2176 ntBASIC19.97■□□□□ 0.79
RC3H1Q5TC82 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RC3H1Q5TC82 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.96■□□□□ 0.79
RC3H1Q5TC82 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms