Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC254562.1-201ENST00000417586 456 ntBASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC004967.1-201ENST00000453589 447 ntBASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC243562.2-201ENST00000561247 970 ntBASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC026150.2-201ENST00000564693 1156 ntBASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AC023511.2-201ENST00000618803 211 ntBASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CBWD3Q5JTY5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CBWD3Q5JTY5 AL139384.1-201ENST00000612143 3047 ntBASIC17.39■□□□□ 0.38
CBWD3Q5JTY5 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBWD3Q5JTY5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBWD3Q5JTY5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBWD3Q5JTY5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBWD3Q5JTY5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 CNN2P11-201ENST00000429351 262 ntBASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBWD3Q5JTY5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CICP13-201ENST00000422015 2789 ntBASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 AL596442.2-201ENST00000610240 980 ntBASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 AC018529.1-201ENST00000613063 361 ntBASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBWD3Q5JTY5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms