Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 AP005018.1-201ENST00000525475 301 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.46■□□□□ 0.55
USH1GQ495M9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 AL662799.1-202ENST00000614205 422 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 BNIP3P1-202ENST00000550043 1585 ntBASIC18.46■□□□□ 0.55
USH1GQ495M9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USH1GQ495M9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USH1GQ495M9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
USH1GQ495M9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USH1GQ495M9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.45■□□□□ 0.54
USH1GQ495M9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.45■□□□□ 0.54
USH1GQ495M9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.45■□□□□ 0.54
USH1GQ495M9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
USH1GQ495M9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.45■□□□□ 0.54
USH1GQ495M9 AC114501.2-201ENST00000439631 535 ntBASIC18.45■□□□□ 0.54
USH1GQ495M9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.45■□□□□ 0.54
USH1GQ495M9 DOC2GP-202ENST00000514950 1163 ntBASIC18.45■□□□□ 0.54
USH1GQ495M9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.45■□□□□ 0.54
USH1GQ495M9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.45■□□□□ 0.54
USH1GQ495M9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USH1GQ495M9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.45■□□□□ 0.54
USH1GQ495M9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
USH1GQ495M9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
USH1GQ495M9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.45■□□□□ 0.54
USH1GQ495M9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USH1GQ495M9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
USH1GQ495M9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.44■□□□□ 0.54
USH1GQ495M9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.44■□□□□ 0.54
USH1GQ495M9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 KRT8P37-201ENST00000451609 1420 ntBASIC18.44■□□□□ 0.54
USH1GQ495M9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USH1GQ495M9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 AZGP1P1-201ENST00000411909 902 ntBASIC18.44■□□□□ 0.54
USH1GQ495M9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.44■□□□□ 0.54
USH1GQ495M9 AL589987.1-201ENST00000453380 819 ntBASIC18.44■□□□□ 0.54
USH1GQ495M9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USH1GQ495M9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.44■□□□□ 0.54
USH1GQ495M9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.44■□□□□ 0.54
USH1GQ495M9 SPDYE22P-201ENST00000582158 798 ntBASIC18.44■□□□□ 0.54
USH1GQ495M9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.44■□□□□ 0.54
USH1GQ495M9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.44■□□□□ 0.54
USH1GQ495M9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
USH1GQ495M9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USH1GQ495M9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USH1GQ495M9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms