Protein–RNA interactions for Protein: Q08623

PUDP, Pseudouridine-5'-phosphatase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPQ08623 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.8□□□□□ -0.04
PUDPQ08623 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PUDPQ08623 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.8□□□□□ -0.04
PUDPQ08623 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.8□□□□□ -0.04
PUDPQ08623 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 AC144831.1-201ENST00000573312 2656 ntBASIC14.8□□□□□ -0.04
PUDPQ08623 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PUDPQ08623 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PUDPQ08623 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PUDPQ08623 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PUDPQ08623 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PUDPQ08623 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PUDPQ08623 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PUDPQ08623 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.79□□□□□ -0.04
PUDPQ08623 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.79□□□□□ -0.04
PUDPQ08623 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
PUDPQ08623 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.79□□□□□ -0.04
PUDPQ08623 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.79□□□□□ -0.04
PUDPQ08623 AC140113.2-201ENST00000604370 208 ntBASIC14.79□□□□□ -0.04
PUDPQ08623 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 FAM197Y3-203ENST00000618346 717 ntBASIC14.79□□□□□ -0.04
PUDPQ08623 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PUDPQ08623 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PUDPQ08623 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 TCAF2P1-201ENST00000291129 2421 ntBASIC14.78□□□□□ -0.04
PUDPQ08623 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.78□□□□□ -0.04
PUDPQ08623 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PUDPQ08623 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms