Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.75■□□□□ 0.75
DDR1Q08345 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DDR1Q08345 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.75■□□□□ 0.75
DDR1Q08345 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.75■□□□□ 0.75
DDR1Q08345 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.75■□□□□ 0.75
DDR1Q08345 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
DDR1Q08345 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.75■□□□□ 0.75
DDR1Q08345 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.75■□□□□ 0.75
DDR1Q08345 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.75■□□□□ 0.75
DDR1Q08345 AC016629.1-201ENST00000596579 586 ntBASIC19.75■□□□□ 0.75
DDR1Q08345 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.75■□□□□ 0.75
DDR1Q08345 AC107373.2-201ENST00000607735 490 ntBASIC19.75■□□□□ 0.75
DDR1Q08345 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.75■□□□□ 0.75
DDR1Q08345 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.75■□□□□ 0.75
DDR1Q08345 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDR1Q08345 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DDR1Q08345 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 AC078925.2-201ENST00000624013 1973 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 AC105020.1-201ENST00000435356 2205 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.74■□□□□ 0.75
DDR1Q08345 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
DDR1Q08345 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.74■□□□□ 0.75
DDR1Q08345 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
DDR1Q08345 BTBD6P1-201ENST00000412176 1267 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.74■□□□□ 0.75
DDR1Q08345 KRT18P43-201ENST00000469825 1281 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.74■□□□□ 0.75
DDR1Q08345 AP001582.1-201ENST00000525856 295 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 AP006547.1-201ENST00000563435 692 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.74■□□□□ 0.75
DDR1Q08345 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
DDR1Q08345 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.74■□□□□ 0.75
DDR1Q08345 AL138709.1-201ENST00000614840 1693 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDR1Q08345 AC134407.2-201ENST00000625089 1978 ntBASIC19.74■□□□□ 0.75
DDR1Q08345 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.73■□□□□ 0.75
DDR1Q08345 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.73■□□□□ 0.75
DDR1Q08345 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
DDR1Q08345 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.73■□□□□ 0.75
DDR1Q08345 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
DDR1Q08345 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.73■□□□□ 0.75
DDR1Q08345 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.73■□□□□ 0.75
DDR1Q08345 RPSAP36-202ENST00000494591 1261 ntBASIC19.73■□□□□ 0.75
DDR1Q08345 HIST2H2BC-201ENST00000498492 580 ntBASIC19.73■□□□□ 0.75
DDR1Q08345 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.73■□□□□ 0.75
DDR1Q08345 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.73■□□□□ 0.75
DDR1Q08345 AC015910.1-201ENST00000579400 975 ntBASIC19.73■□□□□ 0.75
DDR1Q08345 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDR1Q08345 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.73■□□□□ 0.75
DDR1Q08345 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
DDR1Q08345 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.73■□□□□ 0.75
DDR1Q08345 REXO1L1P-202ENST00000608646 1974 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms