Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 MYO15B-237ENST00000642007 4893 ntBASIC13.68□□□□□ -0.22
SSBP1Q04837 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.68□□□□□ -0.22
SSBP1Q04837 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.68□□□□□ -0.22
SSBP1Q04837 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 AC092329.2-201ENST00000598402 547 ntBASIC13.68□□□□□ -0.22
SSBP1Q04837 AC012306.2-201ENST00000609350 630 ntBASIC13.68□□□□□ -0.22
SSBP1Q04837 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 AL805961.1-202ENST00000641562 540 ntBASIC13.68□□□□□ -0.22
SSBP1Q04837 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SSBP1Q04837 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 AC016734.2-201ENST00000624325 1377 ntBASIC13.68□□□□□ -0.22
SSBP1Q04837 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.68□□□□□ -0.22
SSBP1Q04837 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SSBP1Q04837 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
SSBP1Q04837 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP1Q04837 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SSBP1Q04837 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SSBP1Q04837 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 PTCHD3P3-201ENST00000403073 906 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.67□□□□□ -0.22
SSBP1Q04837 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.67□□□□□ -0.22
SSBP1Q04837 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.67□□□□□ -0.22
SSBP1Q04837 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP1Q04837 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 TPSP2-201ENST00000561760 610 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.67□□□□□ -0.22
SSBP1Q04837 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 AC097493.4-201ENST00000641197 219 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SSBP1Q04837 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 AC092127.1-201ENST00000567093 3455 ntBASIC13.67□□□□□ -0.22
SSBP1Q04837 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP1Q04837 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP1Q04837 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP1Q04837 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms