Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 AC092850.2-201ENST00000623821 2697 ntBASIC15.58■□□□□ 0.08
HMGCS1Q01581 AC104640.1-201ENST00000562617 2109 ntBASIC15.58■□□□□ 0.08
HMGCS1Q01581 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
HMGCS1Q01581 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HMGCS1Q01581 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.57■□□□□ 0.08
HMGCS1Q01581 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 CICP13-201ENST00000422015 2789 ntBASIC15.57■□□□□ 0.08
HMGCS1Q01581 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 MIR574-201ENST00000385209 96 ntBASIC15.57■□□□□ 0.08
HMGCS1Q01581 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 AL138918.1-201ENST00000568306 659 ntBASIC15.57■□□□□ 0.08
HMGCS1Q01581 AC140113.2-201ENST00000604370 208 ntBASIC15.57■□□□□ 0.08
HMGCS1Q01581 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 AC126177.1-201ENST00000547829 2218 ntBASIC15.57■□□□□ 0.08
HMGCS1Q01581 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.57■□□□□ 0.08
HMGCS1Q01581 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HMGCS1Q01581 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 AC002056.1-201ENST00000395613 760 ntBASIC15.56■□□□□ 0.08
HMGCS1Q01581 MED15P5-201ENST00000423150 992 ntBASIC15.56■□□□□ 0.08
HMGCS1Q01581 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 AL591424.1-201ENST00000442569 1213 ntBASIC15.56■□□□□ 0.08
HMGCS1Q01581 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 RNA5SP416-201ENST00000516838 111 ntBASIC15.56■□□□□ 0.08
HMGCS1Q01581 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 MIR4321-201ENST00000592276 80 ntBASIC15.56■□□□□ 0.08
HMGCS1Q01581 AC027601.4-201ENST00000611259 610 ntBASIC15.56■□□□□ 0.08
HMGCS1Q01581 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HMGCS1Q01581 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HMGCS1Q01581 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms