Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RIPK4P57078 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 AZGP1P1-201ENST00000411909 902 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.04■□□□□ 0.96
RIPK4P57078 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.04■□□□□ 0.96
RIPK4P57078 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.04■□□□□ 0.96
RIPK4P57078 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 SERBP1P3-201ENST00000459980 809 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.04■□□□□ 0.96
RIPK4P57078 AC044860.1-202ENST00000559481 777 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.04■□□□□ 0.96
RIPK4P57078 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.04■□□□□ 0.96
RIPK4P57078 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.04■□□□□ 0.96
RIPK4P57078 AC092364.2-202ENST00000597012 1073 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 MIR6069-201ENST00000620069 79 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
RIPK4P57078 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
RIPK4P57078 CICP6-201ENST00000457191 2729 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 AC069224.1-201ENST00000566372 1715 ntBASIC21.04■□□□□ 0.96
RIPK4P57078 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
RIPK4P57078 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RIPK4P57078 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
RIPK4P57078 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RIPK4P57078 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.03■□□□□ 0.96
RIPK4P57078 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RIPK4P57078 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RIPK4P57078 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RIPK4P57078 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.03■□□□□ 0.96
RIPK4P57078 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RIPK4P57078 MIR4745-201ENST00000577608 62 ntBASIC21.03■□□□□ 0.96
RIPK4P57078 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RIPK4P57078 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.03■□□□□ 0.96
RIPK4P57078 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.03■□□□□ 0.96
RIPK4P57078 CDC14C-201ENST00000428251 1719 ntBASIC21.03■□□□□ 0.96
RIPK4P57078 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RIPK4P57078 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.03■□□□□ 0.96
RIPK4P57078 AC024909.3-201ENST00000611513 2257 ntBASIC21.03■□□□□ 0.96
RIPK4P57078 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RIPK4P57078 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RIPK4P57078 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 AL603832.2-201ENST00000566195 2125 ntBASIC21.02■□□□□ 0.96
RIPK4P57078 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.02■□□□□ 0.96
RIPK4P57078 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.02■□□□□ 0.96
RIPK4P57078 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.02■□□□□ 0.96
RIPK4P57078 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC21.02■□□□□ 0.96
RIPK4P57078 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.02■□□□□ 0.96
RIPK4P57078 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.02■□□□□ 0.96
RIPK4P57078 AC004840.1-201ENST00000636359 365 ntBASIC21.02■□□□□ 0.96
RIPK4P57078 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.02■□□□□ 0.96
RIPK4P57078 REXO1L1P-202ENST00000608646 1974 ntBASIC21.02■□□□□ 0.96
RIPK4P57078 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
RIPK4P57078 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RIPK4P57078 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RIPK4P57078 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.02■□□□□ 0.95
RIPK4P57078 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
RIPK4P57078 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.95
RIPK4P57078 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RIPK4P57078 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.02■□□□□ 0.95
RIPK4P57078 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RIPK4P57078 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIPK4P57078 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIPK4P57078 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.01■□□□□ 0.95
RIPK4P57078 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RIPK4P57078 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RIPK4P57078 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIPK4P57078 AC018892.3-201ENST00000623986 2499 ntBASIC21.01■□□□□ 0.95
RIPK4P57078 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIPK4P57078 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RIPK4P57078 LINC02447-202ENST00000501888 2146 ntBASIC21.01■□□□□ 0.95
RIPK4P57078 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.01■□□□□ 0.95
RIPK4P57078 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms