Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.02□□□□□ -0.01
PER3P56645 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.02□□□□□ -0.01
PER3P56645 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PER3P56645 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.02□□□□□ -0.01
PER3P56645 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PER3P56645 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 AC092068.3-201ENST00000587894 2016 ntBASIC15.01□□□□□ -0.01
PER3P56645 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PER3P56645 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
PER3P56645 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 NME2P1-201ENST00000426182 414 ntBASIC15.01□□□□□ -0.01
PER3P56645 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.01□□□□□ -0.01
PER3P56645 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 AL596325.1-201ENST00000563991 1082 ntBASIC15.01□□□□□ -0.01
PER3P56645 SPDYE22P-201ENST00000582158 798 ntBASIC15.01□□□□□ -0.01
PER3P56645 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 AC073592.8-201ENST00000624126 511 ntBASIC15.01□□□□□ -0.01
PER3P56645 AC008267.7-201ENST00000624570 1194 ntBASIC15.01□□□□□ -0.01
PER3P56645 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
PER3P56645 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.01□□□□□ -0.01
PER3P56645 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.01□□□□□ -0.01
PER3P56645 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 DBET-201ENST00000630918 3363 ntBASIC15.01□□□□□ -0.01
PER3P56645 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PER3P56645 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PER3P56645 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PER3P56645 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 HMGA1P7-201ENST00000406908 502 ntBASIC15□□□□□ -0.01
PER3P56645 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15□□□□□ -0.01
PER3P56645 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15□□□□□ -0.01
PER3P56645 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 PPP6R2P1-201ENST00000450880 1275 ntBASIC15□□□□□ -0.01
PER3P56645 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PER3P56645 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15□□□□□ -0.01
PER3P56645 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15□□□□□ -0.01
PER3P56645 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15□□□□□ -0.01
PER3P56645 LINC01225-203ENST00000563550 1244 ntBASIC15□□□□□ -0.01
PER3P56645 AC091167.2-201ENST00000579581 588 ntBASIC15□□□□□ -0.01
PER3P56645 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PER3P56645 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PER3P56645 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms