Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.4□□□□□ -0.1
GFRA1P56159 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
GFRA1P56159 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.4□□□□□ -0.1
GFRA1P56159 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.4□□□□□ -0.1
GFRA1P56159 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.4□□□□□ -0.1
GFRA1P56159 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.4□□□□□ -0.1
GFRA1P56159 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.4□□□□□ -0.1
GFRA1P56159 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.4□□□□□ -0.1
GFRA1P56159 AL109936.8-201ENST00000641772 604 ntBASIC14.4□□□□□ -0.1
GFRA1P56159 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.4□□□□□ -0.1
GFRA1P56159 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
GFRA1P56159 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.4□□□□□ -0.1
GFRA1P56159 AL118508.1-201ENST00000613502 2345 ntBASIC14.4□□□□□ -0.11
GFRA1P56159 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
GFRA1P56159 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.39□□□□□ -0.11
GFRA1P56159 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.39□□□□□ -0.11
GFRA1P56159 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.39□□□□□ -0.11
GFRA1P56159 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.39□□□□□ -0.11
GFRA1P56159 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.39□□□□□ -0.11
GFRA1P56159 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.39□□□□□ -0.11
GFRA1P56159 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.39□□□□□ -0.11
GFRA1P56159 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 AC074044.1-201ENST00000609673 707 ntBASIC14.39□□□□□ -0.11
GFRA1P56159 Z97205.2-201ENST00000564697 1639 ntBASIC14.39□□□□□ -0.11
GFRA1P56159 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.39□□□□□ -0.11
GFRA1P56159 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
GFRA1P56159 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.39□□□□□ -0.11
GFRA1P56159 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.39□□□□□ -0.11
GFRA1P56159 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.39□□□□□ -0.11
GFRA1P56159 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GFRA1P56159 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GFRA1P56159 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.38□□□□□ -0.11
GFRA1P56159 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GFRA1P56159 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 REXO1L1P-202ENST00000608646 1974 ntBASIC14.38□□□□□ -0.11
GFRA1P56159 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GFRA1P56159 CYP2T1P-202ENST00000641596 2535 ntBASIC14.38□□□□□ -0.11
GFRA1P56159 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms