Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LIMK2P53671 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LIMK2P53671 MIR770-201ENST00000390219 98 ntBASIC16.28■□□□□ 0.2
LIMK2P53671 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 SPDYE11-202ENST00000450699 704 ntBASIC16.28■□□□□ 0.2
LIMK2P53671 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.28■□□□□ 0.2
LIMK2P53671 SPDYE9P-201ENST00000570642 692 ntBASIC16.28■□□□□ 0.2
LIMK2P53671 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.28■□□□□ 0.2
LIMK2P53671 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 SPDYE10P-202ENST00000612005 668 ntBASIC16.28■□□□□ 0.2
LIMK2P53671 SPDYE8P-202ENST00000612377 668 ntBASIC16.28■□□□□ 0.2
LIMK2P53671 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
LIMK2P53671 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
LIMK2P53671 AC022532.1-201ENST00000624563 1728 ntBASIC16.28■□□□□ 0.2
LIMK2P53671 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LIMK2P53671 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 AC103702.1-201ENST00000548801 2630 ntBASIC16.27■□□□□ 0.2
LIMK2P53671 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.27■□□□□ 0.2
LIMK2P53671 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 KRT8P48-201ENST00000515599 1220 ntBASIC16.27■□□□□ 0.2
LIMK2P53671 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LIMK2P53671 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
LIMK2P53671 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LIMK2P53671 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.27■□□□□ 0.2
LIMK2P53671 LINC00628-201ENST00000628516 1289 ntBASIC16.27■□□□□ 0.2
LIMK2P53671 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.27■□□□□ 0.2
LIMK2P53671 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIMK2P53671 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LIMK2P53671 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LIMK2P53671 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LIMK2P53671 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LIMK2P53671 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.27■□□□□ 0.19
LIMK2P53671 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms