Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16■□□□□ 0.15
ZNF140P52738 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF140P52738 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
ZNF140P52738 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ZNF140P52738 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ZNF140P52738 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
ZNF140P52738 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 SPDYE17-201ENST00000412399 783 ntBASIC15.99■□□□□ 0.15
ZNF140P52738 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF140P52738 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF140P52738 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.99■□□□□ 0.15
ZNF140P52738 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.99■□□□□ 0.15
ZNF140P52738 Z92544.3-201ENST00000624747 417 ntBASIC15.99■□□□□ 0.15
ZNF140P52738 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 PRAL-201ENST00000624952 3286 ntBASIC15.99■□□□□ 0.15
ZNF140P52738 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
ZNF140P52738 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.99■□□□□ 0.15
ZNF140P52738 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF140P52738 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
ZNF140P52738 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.98■□□□□ 0.15
ZNF140P52738 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 MTND6P24-201ENST00000440466 518 ntBASIC15.98■□□□□ 0.15
ZNF140P52738 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 AC006538.3-201ENST00000612495 578 ntBASIC15.98■□□□□ 0.15
ZNF140P52738 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ZNF140P52738 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.98■□□□□ 0.15
ZNF140P52738 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.98■□□□□ 0.15
ZNF140P52738 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.98■□□□□ 0.15
ZNF140P52738 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF140P52738 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF140P52738 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
ZNF140P52738 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.97■□□□□ 0.15
ZNF140P52738 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ZNF140P52738 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF140P52738 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.97■□□□□ 0.15
ZNF140P52738 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms