Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FNTAP49354 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FNTAP49354 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 AL109954.1-202ENST00000564051 2148 ntBASIC16.79■□□□□ 0.28
FNTAP49354 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 CICP14-201ENST00000629111 2732 ntBASIC16.79■□□□□ 0.28
FNTAP49354 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.79■□□□□ 0.28
FNTAP49354 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.79■□□□□ 0.28
FNTAP49354 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.79■□□□□ 0.28
FNTAP49354 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.79■□□□□ 0.28
FNTAP49354 AC012640.2-201ENST00000561606 901 ntBASIC16.79■□□□□ 0.28
FNTAP49354 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 TP73-AS1-207ENST00000624167 988 ntBASIC16.79■□□□□ 0.28
FNTAP49354 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FNTAP49354 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNTAP49354 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.79■□□□□ 0.28
FNTAP49354 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNTAP49354 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
FNTAP49354 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
FNTAP49354 HNRNPDP1-201ENST00000439535 754 ntBASIC16.78■□□□□ 0.28
FNTAP49354 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.78■□□□□ 0.28
FNTAP49354 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.78■□□□□ 0.28
FNTAP49354 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.78■□□□□ 0.28
FNTAP49354 IFNL4P1-201ENST00000607083 540 ntBASIC16.78■□□□□ 0.28
FNTAP49354 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
FNTAP49354 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 AP001282.1-201ENST00000531301 1499 ntBASIC16.78■□□□□ 0.28
FNTAP49354 AP003680.1-201ENST00000598970 3660 ntBASIC16.78■□□□□ 0.28
FNTAP49354 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FNTAP49354 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FNTAP49354 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
FNTAP49354 AC087481.3-201ENST00000602886 1894 ntBASIC16.78■□□□□ 0.28
FNTAP49354 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FNTAP49354 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.78■□□□□ 0.28
FNTAP49354 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNTAP49354 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
FNTAP49354 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms