Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AL603832.2-201ENST00000566195 2125 ntBASIC14.39□□□□□ -0.11
CSNK1A1P48729 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 MIR346-201ENST00000362234 95 ntBASIC14.39□□□□□ -0.11
CSNK1A1P48729 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AC211486.1-202ENST00000416371 468 ntBASIC14.39□□□□□ -0.11
CSNK1A1P48729 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AC069335.1-201ENST00000489972 472 ntBASIC14.39□□□□□ -0.11
CSNK1A1P48729 AC211476.1-201ENST00000503899 468 ntBASIC14.39□□□□□ -0.11
CSNK1A1P48729 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 FOXO1B-201ENST00000504678 1527 ntBASIC14.39□□□□□ -0.11
CSNK1A1P48729 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1A1P48729 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSNK1A1P48729 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.38□□□□□ -0.11
CSNK1A1P48729 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms