Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
HMGCLP35914 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGCLP35914 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGCLP35914 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGCLP35914 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCLP35914 KRT8P12-202ENST00000472924 1397 ntBASIC16.02■□□□□ 0.16
HMGCLP35914 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 REXO1L1P-202ENST00000608646 1974 ntBASIC16.02■□□□□ 0.16
HMGCLP35914 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCLP35914 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCLP35914 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGCLP35914 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCLP35914 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGCLP35914 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 AC107890.1-201ENST00000422478 521 ntBASIC16.02■□□□□ 0.16
HMGCLP35914 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 HLA-V-204ENST00000476601 1289 ntBASIC16.02■□□□□ 0.16
HMGCLP35914 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 AL079307.3-201ENST00000556114 283 ntBASIC16.02■□□□□ 0.16
HMGCLP35914 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCLP35914 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGCLP35914 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGCLP35914 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HMGCLP35914 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGCLP35914 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HMGCLP35914 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGCLP35914 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HMGCLP35914 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HMGCLP35914 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 CETN4P-206ENST00000642099 2168 ntBASIC16.02■□□□□ 0.15
HMGCLP35914 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGCLP35914 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HMGCLP35914 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGCLP35914 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HMGCLP35914 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HMGCLP35914 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 FO393414.2-201ENST00000405153 598 ntBASIC16.01■□□□□ 0.15
HMGCLP35914 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGCLP35914 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.01■□□□□ 0.15
HMGCLP35914 AC069120.2-201ENST00000524091 540 ntBASIC16.01■□□□□ 0.15
HMGCLP35914 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGCLP35914 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGCLP35914 AL589739.1-201ENST00000607720 493 ntBASIC16.01■□□□□ 0.15
HMGCLP35914 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGCLP35914 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGCLP35914 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms