Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SOX6P35712 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SOX6P35712 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.55□□□□□ -0.08
SOX6P35712 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.55□□□□□ -0.08
SOX6P35712 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 PGM5P2-202ENST00000637225 1043 ntBASIC14.55□□□□□ -0.08
SOX6P35712 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SOX6P35712 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 SNX33P1-201ENST00000592116 1762 ntBASIC14.55□□□□□ -0.08
SOX6P35712 GPAA1P2-202ENST00000606848 1787 ntBASIC14.55□□□□□ -0.08
SOX6P35712 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.55□□□□□ -0.08
SOX6P35712 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SOX6P35712 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SOX6P35712 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 AL390755.1-201ENST00000623716 2027 ntBASIC14.54□□□□□ -0.08
SOX6P35712 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 AC013726.1-201ENST00000563747 2285 ntBASIC14.54□□□□□ -0.08
SOX6P35712 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SOX6P35712 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
SOX6P35712 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.54□□□□□ -0.08
SOX6P35712 HLA-F-220ENST00000434407 884 ntBASIC14.54□□□□□ -0.08
SOX6P35712 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.54□□□□□ -0.08
SOX6P35712 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 AC125634.1-201ENST00000438758 1403 ntBASIC14.54□□□□□ -0.08
SOX6P35712 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms