Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PTPN6P29350 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN6P29350 AL078644.1-201ENST00000609881 752 ntBASIC15.33■□□□□ 0.04
PTPN6P29350 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN6P29350 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN6P29350 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN6P29350 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTPN6P29350 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN6P29350 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 MKNK2P1-201ENST00000437526 628 ntBASIC15.32■□□□□ 0.04
PTPN6P29350 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.32■□□□□ 0.04
PTPN6P29350 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN6P29350 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN6P29350 AC005829.1-201ENST00000570002 483 ntBASIC15.32■□□□□ 0.04
PTPN6P29350 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN6P29350 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN6P29350 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN6P29350 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN6P29350 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PTPN6P29350 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN6P29350 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN6P29350 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN6P29350 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.31■□□□□ 0.04
PTPN6P29350 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 HTR5BP-201ENST00000430851 1154 ntBASIC15.31■□□□□ 0.04
PTPN6P29350 FAM58CP-201ENST00000435741 640 ntBASIC15.31■□□□□ 0.04
PTPN6P29350 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 YBX1P5-201ENST00000509441 847 ntBASIC15.31■□□□□ 0.04
PTPN6P29350 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.31■□□□□ 0.04
PTPN6P29350 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN6P29350 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
PTPN6P29350 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
PTPN6P29350 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 AC055717.3-201ENST00000622967 595 ntBASIC15.31■□□□□ 0.04
PTPN6P29350 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN6P29350 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN6P29350 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN6P29350 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN6P29350 AC073439.1-201ENST00000624121 1774 ntBASIC15.31■□□□□ 0.04
PTPN6P29350 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN6P29350 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms