Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CHMP24386 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHMP24386 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHMP24386 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 LINC01144-201ENST00000626198 1710 ntBASIC15.14■□□□□ 0.01
CHMP24386 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 AC092919.2-201ENST00000623631 1645 ntBASIC15.14■□□□□ 0.01
CHMP24386 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP24386 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.14■□□□□ 0.01
CHMP24386 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CHMP24386 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP24386 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CHMP24386 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CHMP24386 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP24386 CEND1P1-201ENST00000451006 455 ntBASIC15.14■□□□□ 0.01
CHMP24386 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.14■□□□□ 0.01
CHMP24386 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP24386 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP24386 AC109635.5-201ENST00000533593 962 ntBASIC15.14■□□□□ 0.01
CHMP24386 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP24386 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.14■□□□□ 0.01
CHMP24386 CYP2A7P1-201ENST00000595391 815 ntBASIC15.14■□□□□ 0.01
CHMP24386 AP001160.2-201ENST00000596071 487 ntBASIC15.14■□□□□ 0.01
CHMP24386 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
CHMP24386 AL009183.1-201ENST00000603760 355 ntBASIC15.14■□□□□ 0.01
CHMP24386 AL161645.1-201ENST00000622716 1255 ntBASIC15.14■□□□□ 0.01
CHMP24386 AC092902.6-201ENST00000641783 218 ntBASIC15.14■□□□□ 0.01
CHMP24386 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP24386 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CHMP24386 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 PRAL-201ENST00000624952 3286 ntBASIC15.14■□□□□ 0.01
CHMP24386 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.14■□□□□ 0.01
CHMP24386 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CHMP24386 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHMP24386 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 RNU1-129P-201ENST00000384064 167 ntBASIC15.13■□□□□ 0.01
CHMP24386 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.13■□□□□ 0.01
CHMP24386 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP24386 AC092183.1-201ENST00000469884 875 ntBASIC15.13■□□□□ 0.01
CHMP24386 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 FAM86C2P-203ENST00000528684 1004 ntBASIC15.13■□□□□ 0.01
CHMP24386 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.13■□□□□ 0.01
CHMP24386 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.13■□□□□ 0.01
CHMP24386 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP24386 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CHMP24386 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 U1.21-201ENST00000580816 167 ntBASIC15.13■□□□□ 0.01
CHMP24386 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP24386 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CHMP24386 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
CHMP24386 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 AC013268.4-201ENST00000637413 2228 ntBASIC15.13■□□□□ 0.01
CHMP24386 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHMP24386 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.13■□□□□ 0.01
CHMP24386 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHMP24386 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms