Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.11■□□□□ 0.17
CHRM3P20309 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 YBX2P1-201ENST00000394192 760 ntBASIC16.11■□□□□ 0.17
CHRM3P20309 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.11■□□□□ 0.17
CHRM3P20309 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.11■□□□□ 0.17
CHRM3P20309 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CHRM3P20309 AL365330.1-201ENST00000607459 531 ntBASIC16.11■□□□□ 0.17
CHRM3P20309 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRM3P20309 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CHRM3P20309 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHRM3P20309 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
CHRM3P20309 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.1■□□□□ 0.17
CHRM3P20309 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.1■□□□□ 0.17
CHRM3P20309 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 SPDYE11-202ENST00000450699 704 ntBASIC16.1■□□□□ 0.17
CHRM3P20309 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 SPDYE9P-201ENST00000570642 692 ntBASIC16.1■□□□□ 0.17
CHRM3P20309 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CHRM3P20309 AC026120.1-201ENST00000611536 926 ntBASIC16.1■□□□□ 0.17
CHRM3P20309 SPDYE10P-202ENST00000612005 668 ntBASIC16.1■□□□□ 0.17
CHRM3P20309 SPDYE8P-202ENST00000612377 668 ntBASIC16.1■□□□□ 0.17
CHRM3P20309 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CHRM3P20309 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRM3P20309 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRM3P20309 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRM3P20309 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRM3P20309 AP003680.1-201ENST00000598970 3660 ntBASIC16.09■□□□□ 0.17
CHRM3P20309 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHRM3P20309 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CHRM3P20309 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRM3P20309 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CHRM3P20309 LINC02447-202ENST00000501888 2146 ntBASIC16.09■□□□□ 0.17
CHRM3P20309 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms