Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 IL9RP2-201ENST00000423948 1312 ntBASIC19.32■□□□□ 0.68
NCLP19338 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.32■□□□□ 0.68
NCLP19338 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC19.32■□□□□ 0.68
NCLP19338 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.32■□□□□ 0.68
NCLP19338 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 AP005117.1-202ENST00000581724 1908 ntBASIC19.32■□□□□ 0.68
NCLP19338 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.32■□□□□ 0.68
NCLP19338 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 HNRNPDP1-201ENST00000439535 754 ntBASIC19.32■□□□□ 0.68
NCLP19338 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.32■□□□□ 0.68
NCLP19338 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NCLP19338 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NCLP19338 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 SNX33P1-201ENST00000592116 1762 ntBASIC19.32■□□□□ 0.68
NCLP19338 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCLP19338 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 AL512652.2-201ENST00000625156 1716 ntBASIC19.31■□□□□ 0.68
NCLP19338 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 AL031731.1-201ENST00000642131 2094 ntBASIC19.31■□□□□ 0.68
NCLP19338 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 AC093909.1-201ENST00000504731 1122 ntBASIC19.31■□□□□ 0.68
NCLP19338 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 AC021087.4-201ENST00000563761 564 ntBASIC19.31■□□□□ 0.68
NCLP19338 MIR7706-201ENST00000613747 67 ntBASIC19.31■□□□□ 0.68
NCLP19338 FAM215A-202ENST00000632077 792 ntBASIC19.31■□□□□ 0.68
NCLP19338 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NCLP19338 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
NCLP19338 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCLP19338 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
NCLP19338 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.3■□□□□ 0.68
NCLP19338 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCLP19338 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.3■□□□□ 0.68
NCLP19338 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.3■□□□□ 0.68
NCLP19338 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.3■□□□□ 0.68
NCLP19338 AL049840.3-201ENST00000602669 611 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms