Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 AC090340.1-201ENST00000620778 4980 ntBASIC17.78■□□□□ 0.44
SMPD1P17405 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMPD1P17405 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.78■□□□□ 0.44
SMPD1P17405 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.78■□□□□ 0.44
SMPD1P17405 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.78■□□□□ 0.44
SMPD1P17405 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMPD1P17405 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMPD1P17405 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.77■□□□□ 0.44
SMPD1P17405 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.77■□□□□ 0.44
SMPD1P17405 AC080080.1-201ENST00000625121 2420 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SMPD1P17405 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.77■□□□□ 0.44
SMPD1P17405 SOCS2P1-201ENST00000417727 557 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.77■□□□□ 0.44
SMPD1P17405 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.77■□□□□ 0.44
SMPD1P17405 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.77■□□□□ 0.44
SMPD1P17405 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
SMPD1P17405 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SMPD1P17405 VDAC1P7-201ENST00000462417 847 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 AC068587.3-201ENST00000526613 355 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.77■□□□□ 0.44
SMPD1P17405 AC120045.2-201ENST00000567334 178 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 CLUHP6-201ENST00000580789 941 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.77■□□□□ 0.44
SMPD1P17405 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.77■□□□□ 0.44
SMPD1P17405 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SMPD1P17405 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.77■□□□□ 0.44
SMPD1P17405 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 AC022211.2-201ENST00000585075 2527 ntBASIC17.77■□□□□ 0.44
SMPD1P17405 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SMPD1P17405 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMPD1P17405 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMPD1P17405 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMPD1P17405 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SMPD1P17405 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 AC005229.1-201ENST00000392885 409 ntBASIC17.76■□□□□ 0.43
SMPD1P17405 C1QBPP1-201ENST00000400117 770 ntBASIC17.76■□□□□ 0.43
SMPD1P17405 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 RPL13AP25-201ENST00000484130 612 ntBASIC17.76■□□□□ 0.43
SMPD1P17405 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.76■□□□□ 0.43
SMPD1P17405 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 PTP4A1P2-201ENST00000546033 454 ntBASIC17.76■□□□□ 0.43
SMPD1P17405 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.76■□□□□ 0.43
SMPD1P17405 MIR4525-201ENST00000580000 75 ntBASIC17.76■□□□□ 0.43
SMPD1P17405 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 AC097359.3-201ENST00000603982 1210 ntBASIC17.76■□□□□ 0.43
SMPD1P17405 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SMPD1P17405 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SMPD1P17405 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.76■□□□□ 0.43
SMPD1P17405 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMPD1P17405 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMPD1P17405 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms