Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
ATP2A2P16615 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.84■□□□□ 0.45
ATP2A2P16615 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A2P16615 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A2P16615 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2A2P16615 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2A2P16615 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
ATP2A2P16615 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A2P16615 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ATP2A2P16615 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A2P16615 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A2P16615 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2A2P16615 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A2P16615 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A2P16615 AC114501.2-201ENST00000439631 535 ntBASIC17.83■□□□□ 0.44
ATP2A2P16615 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A2P16615 AC234783.1-201ENST00000441761 496 ntBASIC17.83■□□□□ 0.44
ATP2A2P16615 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A2P16615 MYCLP2-201ENST00000449268 967 ntBASIC17.83■□□□□ 0.44
ATP2A2P16615 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A2P16615 MIR4525-201ENST00000580000 75 ntBASIC17.83■□□□□ 0.44
ATP2A2P16615 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.83■□□□□ 0.44
ATP2A2P16615 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
ATP2A2P16615 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A2P16615 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A2P16615 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 AC106886.4-201ENST00000623557 2502 ntBASIC17.83■□□□□ 0.44
ATP2A2P16615 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A2P16615 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A2P16615 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 AC116353.5-201ENST00000638148 1699 ntBASIC17.83■□□□□ 0.44
ATP2A2P16615 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A2P16615 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A2P16615 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A2P16615 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
ATP2A2P16615 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2A2P16615 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 AC093525.9-201ENST00000624961 1746 ntBASIC17.82■□□□□ 0.44
ATP2A2P16615 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A2P16615 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A2P16615 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 SERBP1P3-201ENST00000459980 809 ntBASIC17.82■□□□□ 0.44
ATP2A2P16615 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP2A2P16615 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 AC092552.1-201ENST00000547243 906 ntBASIC17.82■□□□□ 0.44
ATP2A2P16615 AP005482.1-201ENST00000563722 1273 ntBASIC17.82■□□□□ 0.44
ATP2A2P16615 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP2A2P16615 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 AC099568.2-201ENST00000609194 695 ntBASIC17.82■□□□□ 0.44
ATP2A2P16615 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.82■□□□□ 0.44
ATP2A2P16615 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A2P16615 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A2P16615 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A2P16615 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms