Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 SOCS2P1-201ENST00000417727 557 ntBASIC18.06■□□□□ 0.48
HOXC6P09630 FAM21FP-201ENST00000426241 1131 ntBASIC18.06■□□□□ 0.48
HOXC6P09630 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.06■□□□□ 0.48
HOXC6P09630 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.06■□□□□ 0.48
HOXC6P09630 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.06■□□□□ 0.48
HOXC6P09630 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.06■□□□□ 0.48
HOXC6P09630 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXC6P09630 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.06■□□□□ 0.48
HOXC6P09630 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.06■□□□□ 0.48
HOXC6P09630 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.06■□□□□ 0.48
HOXC6P09630 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.06■□□□□ 0.48
HOXC6P09630 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.06■□□□□ 0.48
HOXC6P09630 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.06■□□□□ 0.48
HOXC6P09630 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXC6P09630 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.06■□□□□ 0.48
HOXC6P09630 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.05■□□□□ 0.48
HOXC6P09630 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 AC138932.1-201ENST00000534164 6830 ntBASIC18.05■□□□□ 0.48
HOXC6P09630 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HOXC6P09630 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 AC009486.1-201ENST00000569860 813 ntBASIC18.05■□□□□ 0.48
HOXC6P09630 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.05■□□□□ 0.48
HOXC6P09630 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.05■□□□□ 0.48
HOXC6P09630 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 PCDHA12-202ENST00000613593 2588 ntBASIC18.05■□□□□ 0.48
HOXC6P09630 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
HOXC6P09630 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HOXC6P09630 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HOXC6P09630 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HOXC6P09630 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HOXC6P09630 BNIP3P1-202ENST00000550043 1585 ntBASIC18.04■□□□□ 0.48
HOXC6P09630 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.04■□□□□ 0.48
HOXC6P09630 AGGF1P2-201ENST00000426656 2106 ntBASIC18.04■□□□□ 0.48
HOXC6P09630 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.04■□□□□ 0.48
HOXC6P09630 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HOXC6P09630 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HOXC6P09630 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HOXC6P09630 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HOXC6P09630 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms