Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
VIMP08670 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 SPDYE21P-201ENST00000413323 827 ntBASIC16.29■□□□□ 0.2
VIMP08670 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 TSPY22P-201ENST00000427496 604 ntBASIC16.29■□□□□ 0.2
VIMP08670 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.29■□□□□ 0.2
VIMP08670 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.29■□□□□ 0.2
VIMP08670 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.29■□□□□ 0.2
VIMP08670 YBX1P2-201ENST00000489612 999 ntBASIC16.29■□□□□ 0.2
VIMP08670 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 AC090616.6-201ENST00000582640 721 ntBASIC16.29■□□□□ 0.2
VIMP08670 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.29■□□□□ 0.2
VIMP08670 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.29■□□□□ 0.2
VIMP08670 AC139887.4-201ENST00000607877 719 ntBASIC16.29■□□□□ 0.2
VIMP08670 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
VIMP08670 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
VIMP08670 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VIMP08670 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.29■□□□□ 0.2
VIMP08670 LINC00552-201ENST00000625151 2579 ntBASIC16.29■□□□□ 0.2
VIMP08670 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 GRK6P1-201ENST00000400595 1711 ntBASIC16.28■□□□□ 0.2
VIMP08670 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 AC131009.4-201ENST00000624048 1740 ntBASIC16.28■□□□□ 0.2
VIMP08670 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.28■□□□□ 0.2
VIMP08670 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 AC113347.1-201ENST00000413321 391 ntBASIC16.28■□□□□ 0.2
VIMP08670 AC026396.1-201ENST00000419388 421 ntBASIC16.28■□□□□ 0.2
VIMP08670 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.28■□□□□ 0.2
VIMP08670 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 LINC01238-205ENST00000567549 1107 ntBASIC16.28■□□□□ 0.2
VIMP08670 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.28■□□□□ 0.2
VIMP08670 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 AC020765.3-201ENST00000613051 740 ntBASIC16.28■□□□□ 0.2
VIMP08670 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.28■□□□□ 0.2
VIMP08670 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VIMP08670 AC005622.1-201ENST00000636801 1703 ntBASIC16.28■□□□□ 0.2
VIMP08670 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VIMP08670 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VIMP08670 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VIMP08670 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VIMP08670 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 AC010203.1-204ENST00000548782 407 ntBASIC16.27■□□□□ 0.2
VIMP08670 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
VIMP08670 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.27■□□□□ 0.2
VIMP08670 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VIMP08670 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.27■□□□□ 0.2
VIMP08670 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.27■□□□□ 0.2
VIMP08670 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VIMP08670 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms