Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
CTSDP07339 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.45□□□□□ -0.26
CTSDP07339 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CTSDP07339 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.45□□□□□ -0.26
CTSDP07339 GGTLC5P-201ENST00000617623 998 ntBASIC13.45□□□□□ -0.26
CTSDP07339 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
CTSDP07339 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 AC026396.1-201ENST00000419388 421 ntBASIC13.44□□□□□ -0.26
CTSDP07339 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.44□□□□□ -0.26
CTSDP07339 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.44□□□□□ -0.26
CTSDP07339 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.44□□□□□ -0.26
CTSDP07339 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.44□□□□□ -0.26
CTSDP07339 AC021097.1-201ENST00000607902 574 ntBASIC13.44□□□□□ -0.26
CTSDP07339 AC092119.3-201ENST00000612618 583 ntBASIC13.44□□□□□ -0.26
CTSDP07339 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 AL161772.1-201ENST00000610494 4412 ntBASIC13.44□□□□□ -0.26
CTSDP07339 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CTSDP07339 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CTSDP07339 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.44□□□□□ -0.26
CTSDP07339 AC012569.1-201ENST00000591191 1524 ntBASIC13.44□□□□□ -0.26
CTSDP07339 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CTSDP07339 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
CTSDP07339 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.43□□□□□ -0.26
CTSDP07339 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms