Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
APOBP04114 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC9.82□□□□□ -0.84
APOBP04114 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 AC234644.1-201ENST00000406065 370 ntBASIC9.82□□□□□ -0.84
APOBP04114 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 KSR1-207ENST00000578981 748 ntTSL 4 BASIC9.82□□□□□ -0.84
APOBP04114 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC9.82□□□□□ -0.84
APOBP04114 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
APOBP04114 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 AC134407.2-201ENST00000625089 1978 ntBASIC9.82□□□□□ -0.84
APOBP04114 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 AL160314.3-201ENST00000556041 767 ntBASIC9.82□□□□□ -0.84
APOBP04114 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC9.82□□□□□ -0.84
APOBP04114 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
APOBP04114 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 KLF2P2-201ENST00000416807 1039 ntBASIC9.81□□□□□ -0.84
APOBP04114 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
APOBP04114 MIR3147-201ENST00000577811 66 ntBASIC9.81□□□□□ -0.84
APOBP04114 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 AL354989.2-201ENST00000435838 1540 ntBASIC9.81□□□□□ -0.84
APOBP04114 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC9.81□□□□□ -0.84
APOBP04114 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC9.81□□□□□ -0.84
APOBP04114 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 PTPA-218ENST00000435132 618 ntTSL 2 BASIC9.81□□□□□ -0.84
APOBP04114 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
APOBP04114 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
APOBP04114 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
APOBP04114 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
APOBP04114 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC9.81□□□□□ -0.84
APOBP04114 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC9.81□□□□□ -0.84
APOBP04114 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
APOBP04114 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
APOBP04114 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC9.8□□□□□ -0.84
APOBP04114 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms