Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A1P02462 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A1P02462 AL355864.2-201ENST00000447420 863 ntBASIC19.35■□□□□ 0.69
COL4A1P02462 FO681548.1-201ENST00000455617 1132 ntBASIC19.35■□□□□ 0.69
COL4A1P02462 RNA5SP412-201ENST00000516234 123 ntBASIC19.35■□□□□ 0.69
COL4A1P02462 C2orf69P2-201ENST00000562032 1123 ntBASIC19.35■□□□□ 0.69
COL4A1P02462 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A1P02462 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A1P02462 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL4A1P02462 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A1P02462 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A1P02462 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A1P02462 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A1P02462 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A1P02462 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 AC134312.5-201ENST00000568031 1313 ntBASIC19.34■□□□□ 0.69
COL4A1P02462 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL4A1P02462 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL4A1P02462 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.34■□□□□ 0.69
COL4A1P02462 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL4A1P02462 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COL4A1P02462 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.34■□□□□ 0.69
COL4A1P02462 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.34■□□□□ 0.69
COL4A1P02462 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL4A1P02462 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.34■□□□□ 0.69
COL4A1P02462 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL4A1P02462 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
COL4A1P02462 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A1P02462 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.33■□□□□ 0.69
COL4A1P02462 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.33■□□□□ 0.69
COL4A1P02462 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A1P02462 AC007551.1-201ENST00000457394 519 ntBASIC19.33■□□□□ 0.69
COL4A1P02462 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.33■□□□□ 0.69
COL4A1P02462 MIR6787-201ENST00000616675 61 ntBASIC19.33■□□□□ 0.69
COL4A1P02462 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A1P02462 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A1P02462 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.33■□□□□ 0.69
COL4A1P02462 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL4A1P02462 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.33■□□□□ 0.69
COL4A1P02462 AC026471.1-201ENST00000564629 3026 ntBASIC19.33■□□□□ 0.69
COL4A1P02462 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
COL4A1P02462 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A1P02462 AC124067.4-201ENST00000519691 2379 ntBASIC19.33■□□□□ 0.68
COL4A1P02462 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COL4A1P02462 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
COL4A1P02462 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 MIR648-201ENST00000385046 94 ntBASIC19.33■□□□□ 0.68
COL4A1P02462 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A1P02462 RPL13AP20-201ENST00000459725 609 ntBASIC19.33■□□□□ 0.68
COL4A1P02462 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.33■□□□□ 0.68
COL4A1P02462 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.33■□□□□ 0.68
COL4A1P02462 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A1P02462 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.33■□□□□ 0.68
COL4A1P02462 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL4A1P02462 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.33■□□□□ 0.68
COL4A1P02462 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.33■□□□□ 0.68
COL4A1P02462 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
COL4A1P02462 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A1P02462 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COL4A1P02462 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COL4A1P02462 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A1P02462 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
COL4A1P02462 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COL4A1P02462 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A1P02462 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A1P02462 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A1P02462 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A1P02462 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A1P02462 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
COL4A1P02462 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.32■□□□□ 0.68
COL4A1P02462 FAM86HP-204ENST00000513466 959 ntBASIC19.32■□□□□ 0.68
COL4A1P02462 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.32■□□□□ 0.68
COL4A1P02462 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL4A1P02462 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms