Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 CROCCP4-201ENST00000457096 498 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.16■□□□□ 0.66
COL1A1P02452 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.16■□□□□ 0.66
COL1A1P02452 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.16■□□□□ 0.66
COL1A1P02452 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.16■□□□□ 0.66
COL1A1P02452 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.16■□□□□ 0.66
COL1A1P02452 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.15■□□□□ 0.66
COL1A1P02452 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.15■□□□□ 0.66
COL1A1P02452 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 AC018665.1-201ENST00000622927 1362 ntBASIC19.15■□□□□ 0.66
COL1A1P02452 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL1A1P02452 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.15■□□□□ 0.66
COL1A1P02452 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.15■□□□□ 0.66
COL1A1P02452 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.15■□□□□ 0.66
COL1A1P02452 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.15■□□□□ 0.66
COL1A1P02452 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL1A1P02452 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.14■□□□□ 0.66
COL1A1P02452 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.14■□□□□ 0.66
COL1A1P02452 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL1A1P02452 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL1A1P02452 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL1A1P02452 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL1A1P02452 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL1A1P02452 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.14■□□□□ 0.65
COL1A1P02452 INTS4P2-202ENST00000614726 2019 ntBASIC19.14■□□□□ 0.65
COL1A1P02452 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.14■□□□□ 0.65
COL1A1P02452 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.14■□□□□ 0.65
COL1A1P02452 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COL1A1P02452 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL1A1P02452 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.14■□□□□ 0.65
COL1A1P02452 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.14■□□□□ 0.65
COL1A1P02452 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.14■□□□□ 0.65
COL1A1P02452 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.14■□□□□ 0.65
COL1A1P02452 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.14■□□□□ 0.65
COL1A1P02452 AL049840.4-201ENST00000602422 811 ntBASIC19.14■□□□□ 0.65
COL1A1P02452 AC000095.1-201ENST00000603208 874 ntBASIC19.14■□□□□ 0.65
COL1A1P02452 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL1A1P02452 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 AL121723.1-201ENST00000445194 1519 ntBASIC19.14■□□□□ 0.65
COL1A1P02452 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COL1A1P02452 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL1A1P02452 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COL1A1P02452 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.13■□□□□ 0.65
COL1A1P02452 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 AL133338.1-201ENST00000565695 1517 ntBASIC19.13■□□□□ 0.65
COL1A1P02452 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.13■□□□□ 0.65
COL1A1P02452 AL359711.2-201ENST00000563105 872 ntBASIC19.13■□□□□ 0.65
COL1A1P02452 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms