Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 AL592424.1-201ENST00000563624 1536 ntBASIC23.7■■□□□ 1.38
RAPGEF3O95398 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF3O95398 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF3O95398 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 NUP210P1-202ENST00000504322 710 ntBASIC23.69■■□□□ 1.38
RAPGEF3O95398 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 HLA-C-210ENST00000640219 976 ntBASIC23.69■■□□□ 1.38
RAPGEF3O95398 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 OS9-205ENST00000413095 1660 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC23.69■■□□□ 1.38
RAPGEF3O95398 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF3O95398 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 HLA-A-202ENST00000376806 1854 ntBASIC23.68■■□□□ 1.38
RAPGEF3O95398 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 AC024681.1-201ENST00000521917 487 ntBASIC23.68■■□□□ 1.38
RAPGEF3O95398 KLK11-210ENST00000600362 759 ntTSL 3 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 AL645939.5-201ENST00000606834 243 ntBASIC23.68■■□□□ 1.38
RAPGEF3O95398 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF3O95398 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC23.68■■□□□ 1.38
RAPGEF3O95398 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 AC060834.1-201ENST00000443027 2032 ntBASIC23.67■■□□□ 1.38
RAPGEF3O95398 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 RAC2-202ENST00000401529 569 ntTSL 4 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 ACTG1P2-201ENST00000415776 1125 ntBASIC23.67■■□□□ 1.38
RAPGEF3O95398 ACTG1P11-201ENST00000425411 1125 ntBASIC23.67■■□□□ 1.38
RAPGEF3O95398 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 AC005730.2-201ENST00000564549 1184 ntBASIC23.67■■□□□ 1.38
RAPGEF3O95398 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RAPGEF3O95398 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RAPGEF3O95398 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms