Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MIR6069-201ENST00000620069 79 ntBASIC16.87■□□□□ 0.29
BEST1O76090 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.87■□□□□ 0.29
BEST1O76090 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BEST1O76090 PCDHA1-201ENST00000378133 2726 ntBASIC16.87■□□□□ 0.29
BEST1O76090 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST1O76090 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BEST1O76090 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.87■□□□□ 0.29
BEST1O76090 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
BEST1O76090 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
BEST1O76090 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 ZNF890P-202ENST00000530367 1156 ntBASIC16.86■□□□□ 0.29
BEST1O76090 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.86■□□□□ 0.29
BEST1O76090 AL109936.8-201ENST00000641772 604 ntBASIC16.86■□□□□ 0.29
BEST1O76090 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.86■□□□□ 0.29
BEST1O76090 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.86■□□□□ 0.29
BEST1O76090 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BEST1O76090 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
BEST1O76090 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.85■□□□□ 0.29
BEST1O76090 AC112504.1-201ENST00000623415 1841 ntBASIC16.85■□□□□ 0.29
BEST1O76090 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
BEST1O76090 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST1O76090 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST1O76090 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.85■□□□□ 0.29
BEST1O76090 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.85■□□□□ 0.29
BEST1O76090 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.85■□□□□ 0.29
BEST1O76090 AC025048.3-201ENST00000590609 569 ntBASIC16.85■□□□□ 0.29
BEST1O76090 LINC02084-201ENST00000606069 1096 ntBASIC16.85■□□□□ 0.29
BEST1O76090 AC005702.4-201ENST00000618393 416 ntBASIC16.85■□□□□ 0.29
BEST1O76090 AC008761.3-201ENST00000624803 892 ntBASIC16.85■□□□□ 0.29
BEST1O76090 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.85■□□□□ 0.29
BEST1O76090 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BEST1O76090 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
BEST1O76090 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.85■□□□□ 0.29
BEST1O76090 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BEST1O76090 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
BEST1O76090 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 AC026691.1-201ENST00000602502 2017 ntBASIC16.84■□□□□ 0.29
BEST1O76090 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.84■□□□□ 0.29
BEST1O76090 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST1O76090 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.84■□□□□ 0.29
BEST1O76090 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BEST1O76090 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms