Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.16□□□□□ -0.46
SNAI2O43623 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.16□□□□□ -0.46
SNAI2O43623 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SNAI2O43623 ABCD1P5-201ENST00000445663 754 ntBASIC12.16□□□□□ -0.46
SNAI2O43623 PRYP5-201ENST00000451909 266 ntBASIC12.16□□□□□ -0.46
SNAI2O43623 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
SNAI2O43623 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.16□□□□□ -0.46
SNAI2O43623 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.16□□□□□ -0.46
SNAI2O43623 AC091167.2-201ENST00000579581 588 ntBASIC12.16□□□□□ -0.46
SNAI2O43623 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.16□□□□□ -0.46
SNAI2O43623 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.16□□□□□ -0.46
SNAI2O43623 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.16□□□□□ -0.46
SNAI2O43623 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SNAI2O43623 REXO1L8P-201ENST00000604378 1897 ntBASIC12.16□□□□□ -0.46
SNAI2O43623 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SNAI2O43623 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SNAI2O43623 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.16□□□□□ -0.46
SNAI2O43623 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNAI2O43623 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 KRT18P1-202ENST00000452408 1331 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 NCF1C-201ENST00000438382 1427 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 MIR648-201ENST00000385046 94 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 IGHV3-47-201ENST00000425060 335 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 PAWRP1-201ENST00000451083 565 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.15□□□□□ -0.46
SNAI2O43623 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
SNAI2O43623 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 AC010654.1-201ENST00000615722 808 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.15□□□□□ -0.46
SNAI2O43623 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNAI2O43623 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SNAI2O43623 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SNAI2O43623 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SNAI2O43623 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms