Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 TOMM22P5-201ENST00000416399 439 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 FAM86LP-201ENST00000478302 853 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 RAB43P1-201ENST00000561790 589 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 AL359711.2-201ENST00000563105 872 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 AC106886.1-201ENST00000568660 600 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.49■□□□□ 0.87
KCNQ3O43525 AC010319.3-201ENST00000597028 470 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 AL450472.2-201ENST00000603663 1156 ntBASIC20.49■□□□□ 0.87
KCNQ3O43525 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
KCNQ3O43525 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.49■□□□□ 0.87
KCNQ3O43525 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
KCNQ3O43525 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNQ3O43525 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNQ3O43525 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNQ3O43525 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNQ3O43525 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 ANKRD19P-201ENST00000338192 862 ntBASIC20.48■□□□□ 0.87
KCNQ3O43525 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.48■□□□□ 0.87
KCNQ3O43525 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.48■□□□□ 0.87
KCNQ3O43525 AC104596.2-201ENST00000512793 793 ntBASIC20.48■□□□□ 0.87
KCNQ3O43525 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNQ3O43525 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
KCNQ3O43525 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNQ3O43525 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNQ3O43525 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
KCNQ3O43525 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNQ3O43525 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.47■□□□□ 0.87
KCNQ3O43525 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.47■□□□□ 0.87
KCNQ3O43525 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
KCNQ3O43525 MIR658-201ENST00000385210 100 ntBASIC20.47■□□□□ 0.87
KCNQ3O43525 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.47■□□□□ 0.87
KCNQ3O43525 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.47■□□□□ 0.87
KCNQ3O43525 USP32P1-208ENST00000506594 1164 ntBASIC20.47■□□□□ 0.87
KCNQ3O43525 BRI3BPP1-201ENST00000594224 787 ntBASIC20.47■□□□□ 0.87
KCNQ3O43525 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
KCNQ3O43525 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.47■□□□□ 0.87
KCNQ3O43525 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KCNQ3O43525 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNQ3O43525 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.46■□□□□ 0.87
KCNQ3O43525 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNQ3O43525 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.46■□□□□ 0.87
KCNQ3O43525 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms