Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 ME2P1-201ENST00000426028 1970 ntBASIC11.61□□□□□ -0.55
PAX4O43316 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 WASH6P-202ENST00000359512 1437 ntBASIC11.6□□□□□ -0.55
PAX4O43316 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 MCCD1P2-201ENST00000423228 335 ntBASIC11.6□□□□□ -0.55
PAX4O43316 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.6□□□□□ -0.55
PAX4O43316 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 AC090142.2-201ENST00000483263 416 ntBASIC11.6□□□□□ -0.55
PAX4O43316 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 FAM86C2P-203ENST00000528684 1004 ntBASIC11.6□□□□□ -0.55
PAX4O43316 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.6□□□□□ -0.55
PAX4O43316 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.6□□□□□ -0.55
PAX4O43316 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.6□□□□□ -0.55
PAX4O43316 AL078644.1-201ENST00000609881 752 ntBASIC11.6□□□□□ -0.55
PAX4O43316 AC091812.2-201ENST00000619081 385 ntBASIC11.6□□□□□ -0.55
PAX4O43316 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PAX4O43316 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.6□□□□□ -0.55
PAX4O43316 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PAX4O43316 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PAX4O43316 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 AC016027.1-202ENST00000607927 1699 ntBASIC11.59□□□□□ -0.55
PAX4O43316 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.59□□□□□ -0.55
PAX4O43316 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PAX4O43316 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PAX4O43316 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms