Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC026396.1-201ENST00000419388 421 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.1□□□□□ -0.63
NDUFA1O15239 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.1□□□□□ -0.63
NDUFA1O15239 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC132008.2-207ENST00000454517 770 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC106795.1-205ENST00000512851 1056 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC139887.3-201ENST00000568585 713 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 AL139424.1-201ENST00000607572 797 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 AC093458.2-201ENST00000623150 629 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
NDUFA1O15239 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.09□□□□□ -0.63
NDUFA1O15239 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AP001269.4-201ENST00000609611 512 ntBASIC11.09□□□□□ -0.63
NDUFA1O15239 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.09□□□□□ -0.63
NDUFA1O15239 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 CICP24-201ENST00000605464 2705 ntBASIC11.09□□□□□ -0.63
NDUFA1O15239 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.09□□□□□ -0.63
NDUFA1O15239 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.09□□□□□ -0.63
NDUFA1O15239 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
NDUFA1O15239 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NDUFA1O15239 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
NDUFA1O15239 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.08□□□□□ -0.64
NDUFA1O15239 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.08□□□□□ -0.64
NDUFA1O15239 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NDUFA1O15239 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms