Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SOX1O00570 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SOX1O00570 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SOX1O00570 AL138781.2-201ENST00000617896 1843 ntBASIC16.91■□□□□ 0.3
SOX1O00570 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
SOX1O00570 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.91■□□□□ 0.3
SOX1O00570 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.91■□□□□ 0.3
SOX1O00570 AC026316.1-201ENST00000398900 414 ntBASIC16.91■□□□□ 0.3
SOX1O00570 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.91■□□□□ 0.3
SOX1O00570 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.91■□□□□ 0.3
SOX1O00570 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.91■□□□□ 0.3
SOX1O00570 AL161670.2-201ENST00000557650 1227 ntBASIC16.91■□□□□ 0.3
SOX1O00570 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SOX1O00570 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.91■□□□□ 0.3
SOX1O00570 PPY2P-201ENST00000582808 702 ntBASIC16.91■□□□□ 0.3
SOX1O00570 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.91■□□□□ 0.3
SOX1O00570 AC103691.2-201ENST00000618824 433 ntBASIC16.91■□□□□ 0.3
SOX1O00570 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.91■□□□□ 0.3
SOX1O00570 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.91■□□□□ 0.3
SOX1O00570 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SOX1O00570 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 AL355312.1-201ENST00000407115 2176 ntBASIC16.9■□□□□ 0.3
SOX1O00570 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.9■□□□□ 0.3
SOX1O00570 CD8B2-202ENST00000417670 633 ntBASIC16.9■□□□□ 0.3
SOX1O00570 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.9■□□□□ 0.3
SOX1O00570 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.9■□□□□ 0.3
SOX1O00570 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 IGLV3-15-201ENST00000518356 244 ntBASIC16.9■□□□□ 0.3
SOX1O00570 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.9■□□□□ 0.3
SOX1O00570 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.9■□□□□ 0.3
SOX1O00570 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.9■□□□□ 0.3
SOX1O00570 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.9■□□□□ 0.3
SOX1O00570 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.9■□□□□ 0.3
SOX1O00570 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SOX1O00570 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 AC135050.7-201ENST00000624508 2218 ntBASIC16.9■□□□□ 0.3
SOX1O00570 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.9■□□□□ 0.3
SOX1O00570 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.9■□□□□ 0.3
SOX1O00570 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SOX1O00570 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SOX1O00570 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.89■□□□□ 0.29
SOX1O00570 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SOX1O00570 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SOX1O00570 AC078991.1-201ENST00000437297 610 ntBASIC16.89■□□□□ 0.29
SOX1O00570 AC026410.3-201ENST00000514280 936 ntBASIC16.89■□□□□ 0.29
SOX1O00570 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.89■□□□□ 0.29
SOX1O00570 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SOX1O00570 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms