Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX39AO00148 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX39AO00148 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC044860.1-202ENST00000559481 777 ntBASIC18.12■□□□□ 0.49
DDX39AO00148 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC010336.2-201ENST00000564226 506 ntBASIC18.12■□□□□ 0.49
DDX39AO00148 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 AC008761.3-201ENST00000624803 892 ntBASIC18.12■□□□□ 0.49
DDX39AO00148 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX39AO00148 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX39AO00148 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
DDX39AO00148 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
DDX39AO00148 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.11■□□□□ 0.49
DDX39AO00148 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
DDX39AO00148 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
DDX39AO00148 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
DDX39AO00148 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.11■□□□□ 0.49
DDX39AO00148 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX39AO00148 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX39AO00148 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.11■□□□□ 0.49
DDX39AO00148 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
DDX39AO00148 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.11■□□□□ 0.49
DDX39AO00148 AC004840.1-201ENST00000636359 365 ntBASIC18.11■□□□□ 0.49
DDX39AO00148 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
DDX39AO00148 AL691432.1-201ENST00000596308 1422 ntBASIC18.11■□□□□ 0.49
DDX39AO00148 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
DDX39AO00148 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX39AO00148 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX39AO00148 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DDX39AO00148 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX39AO00148 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.1■□□□□ 0.49
DDX39AO00148 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
DDX39AO00148 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
DDX39AO00148 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 AC134407.2-201ENST00000625089 1978 ntBASIC18.1■□□□□ 0.49
DDX39AO00148 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
DDX39AO00148 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms