Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 AL589702.1-201ENST00000641229 1509 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 REXO1L8P-201ENST00000604378 1897 ntBASIC16.18■□□□□ 0.18
CFAP99D6REC4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP99D6REC4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.18■□□□□ 0.18
CFAP99D6REC4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 KRT18P32-201ENST00000424695 1287 ntBASIC16.17■□□□□ 0.18
CFAP99D6REC4 CNN2P11-201ENST00000429351 262 ntBASIC16.17■□□□□ 0.18
CFAP99D6REC4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 AC024267.1-201ENST00000582320 895 ntBASIC16.17■□□□□ 0.18
CFAP99D6REC4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 AL691403.2-201ENST00000618460 490 ntBASIC16.17■□□□□ 0.18
CFAP99D6REC4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 MTHFR-217ENST00000641820 1569 ntBASIC16.17■□□□□ 0.18
CFAP99D6REC4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP99D6REC4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP99D6REC4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 AC006449.5-201ENST00000610658 2098 ntBASIC16.16■□□□□ 0.18
CFAP99D6REC4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 MIR346-201ENST00000362234 95 ntBASIC16.16■□□□□ 0.18
CFAP99D6REC4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 AL627223.1-201ENST00000416693 442 ntBASIC16.16■□□□□ 0.18
CFAP99D6REC4 AC142381.1-201ENST00000426099 345 ntBASIC16.16■□□□□ 0.18
CFAP99D6REC4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 MTND2P7-201ENST00000521337 640 ntBASIC16.16■□□□□ 0.18
CFAP99D6REC4 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.16■□□□□ 0.18
CFAP99D6REC4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP99D6REC4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.15■□□□□ 0.18
CFAP99D6REC4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CFAP99D6REC4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms