Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRRM4A7MD48 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 TFAMP1-201ENST00000412727 736 ntBASIC13.01□□□□□ -0.33
SRRM4A7MD48 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 AC092902.6-201ENST00000641783 218 ntBASIC13.01□□□□□ -0.33
SRRM4A7MD48 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.01□□□□□ -0.33
SRRM4A7MD48 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.01□□□□□ -0.33
SRRM4A7MD48 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRRM4A7MD48 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SRRM4A7MD48 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 AC134407.2-201ENST00000625089 1978 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13□□□□□ -0.33
SRRM4A7MD48 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13□□□□□ -0.33
SRRM4A7MD48 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 AKAP8P1-201ENST00000434743 1349 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13□□□□□ -0.33
SRRM4A7MD48 AL355306.1-201ENST00000415580 579 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 AC098859.1-201ENST00000502915 1238 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRRM4A7MD48 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
SRRM4A7MD48 AL135744.1-201ENST00000565098 629 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13□□□□□ -0.33
SRRM4A7MD48 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13□□□□□ -0.33
SRRM4A7MD48 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13□□□□□ -0.33
SRRM4A7MD48 SPTSSB-204ENST00000617024 1292 ntBASIC13□□□□□ -0.33
SRRM4A7MD48 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13□□□□□ -0.33
SRRM4A7MD48 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13□□□□□ -0.33
SRRM4A7MD48 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRRM4A7MD48 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms