Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 REXO1L8P-201ENST00000604378 1897 ntBASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SMIM9A6NGZ8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 MIR648-201ENST00000385046 94 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 METTL21AP1-201ENST00000438852 635 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 SPDYE14P-201ENST00000442619 822 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 FAM86GP-201ENST00000448322 971 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AL139010.1-201ENST00000454878 894 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 ALOX12P2-203ENST00000570921 1945 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AC006449.6-201ENST00000612330 2296 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AC003101.2-201ENST00000612557 442 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 MIR6080-201ENST00000617359 66 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 MTHFR-217ENST00000641820 1569 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 LINC02228-204ENST00000642115 2962 ntBASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
SMIM9A6NGZ8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM9A6NGZ8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms