Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FAM8A2P-201ENST00000528813 1142 ntBASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 AL022328.1-201ENST00000610050 478 ntBASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 AC060834.1-201ENST00000443027 2032 ntBASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 AP001094.4-201ENST00000579008 2176 ntBASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PCDHA12-202ENST00000613593 2588 ntBASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC187A0A096LP49 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL691432.1-201ENST00000596308 1422 ntBASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 ACTG1P3-201ENST00000431775 1114 ntBASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 EEF1DP4-201ENST00000446006 880 ntBASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 CTBP2P5-201ENST00000454986 1264 ntBASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 RPSAP52-203ENST00000622976 1023 ntBASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC187A0A096LP49 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 AC080080.1-201ENST00000625121 2420 ntBASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC187A0A096LP49 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 KRT8P37-201ENST00000451609 1420 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AZGP1P1-201ENST00000411909 902 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 RPL13P2-201ENST00000440687 659 ntBASIC15.2■□□□□ 0.02
CCDC187A0A096LP49 AC245100.5-201ENST00000452108 331 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms