Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 U91328.1-201ENST00000437528 223 ntBASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC135586.1-201ENST00000539323 574 ntBASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC004840.1-201ENST00000636359 365 ntBASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 AC022188.1-201ENST00000620960 1664 ntBASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 HLA-V-201ENST00000429037 534 ntBASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 AC006277.1-201ENST00000624348 1610 ntBASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 AC007950.2-201ENST00000615045 2347 ntBASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 AL513523.2-202ENST00000427283 2040 ntBASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGA9Q9Y5G4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 AP006294.1-201ENST00000415407 339 ntBASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 RN7SL618P-201ENST00000477850 296 ntBASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 AC093004.1-201ENST00000508850 424 ntBASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDHGA9Q9Y5G4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms