Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AC055717.3-201ENST00000622967 595 ntBASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB13Q9Y5F0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 MIR648-201ENST00000385046 94 ntBASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 AP006288.1-201ENST00000446065 395 ntBASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 AC134684.3-201ENST00000641758 218 ntBASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHB13Q9Y5F0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 FAM220BP-201ENST00000377689 816 ntBASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 MIR1233-2-201ENST00000408138 82 ntBASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 MIR1233-1-201ENST00000408722 82 ntBASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 AC004967.1-201ENST00000453589 447 ntBASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 SLC25A39P2-201ENST00000537614 270 ntBASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHB13Q9Y5F0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHB13Q9Y5F0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms