Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 AC025062.2-201ENST00000605477 670 ntBASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 AC011477.6-201ENST00000604980 1927 ntBASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D4Q9Y2X8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2D4Q9Y2X8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms