Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 AC109322.1-201ENST00000524499 1264 ntBASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 LINC01144-201ENST00000626198 1710 ntBASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 AC005622.1-201ENST00000636801 1703 ntBASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.89□□□□□ -0.03
RPH3AQ9Y2J0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 AC190387.1-201ENST00000551683 408 ntBASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 LINC00554-201ENST00000564841 3011 ntBASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPH3AQ9Y2J0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AC092364.2-201ENST00000596710 2692 ntBASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 MIR346-201ENST00000362234 95 ntBASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AC142381.1-201ENST00000426099 345 ntBASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPH3AQ9Y2J0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms