Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.88■■□□□ 1.09
NINLQ9Y2I6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 FAM8A2P-201ENST00000528813 1142 ntBASIC21.87■■□□□ 1.09
NINLQ9Y2I6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 AC090340.1-201ENST00000620778 4980 ntBASIC21.87■■□□□ 1.09
NINLQ9Y2I6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 AL512384.1-201ENST00000406683 331 ntBASIC21.87■■□□□ 1.09
NINLQ9Y2I6 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.87■■□□□ 1.09
NINLQ9Y2I6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 MIR658-201ENST00000385210 100 ntBASIC21.86■■□□□ 1.09
NINLQ9Y2I6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 AL442647.2-201ENST00000429864 857 ntBASIC21.86■■□□□ 1.09
NINLQ9Y2I6 AC011495.1-201ENST00000498085 584 ntBASIC21.86■■□□□ 1.09
NINLQ9Y2I6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NINLQ9Y2I6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NINLQ9Y2I6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms